MRIQC: individual bold report

Summary

  • BIDS filename: sub-1006_task-MID_run-01_bold.
  • Date and time: 2020-01-23, 00:28.
  • MRIQC version: 0.15.1.
  • Workflow details:
    • Framewise Displacement was computed using AFNI 3dvolreg
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot
Spikes

No high-frequency spikes were found in this dataset

ICA components

Other

aor0.0018493584905660376
aqi0.005668789056603774
dummy_trs0
dvarsnstd28.43938279867423
dvarsstd1.6591822473484839
dvarsvstd1.0207844277272728
efc0.4165258708956842
fber6026.97900390625
fdmean0.10398513511742417
fdnum7
fdperc2.641509433962264
fwhmavg2.593485555555555
fwhmx2.48152
fwhmy2.85393
fwhmz2.4450066666666666
gcor0.0173831
gsrx-0.017435116693377495
gsry0.0258935559540987
sizet265
sizex80
sizey80
sizez52
snr4.687860731218984
spacingtr1.75
spacingx3.0
spacingy3.0
spacingz3.0
spikes_num0
summarybgk44.48623274657653
summarybgmad97.30912780761719
summarybgmean431.1653747558594
summarybgmedian163.8192138671875
summarybgn238514.0
summarybgp0573.02764167785645
summarybgp951925.5022766113257
summarybgstdv917.1276245117188
summaryfgk3.7814760417564903
summaryfgmad1820.5096435546875
summaryfgmean12601.21484375
summaryfgmedian12972.5712890625
summaryfgn45527.0
summaryfgp056830.882421875001
summaryfgp9515971.108691406249
summaryfgstdv2767.238525390625
tsnr81.12445831298828
AcquisitionMatrixPE80
AcquisitionNumber1
AcquisitionTime13:44:19.492500
BandwidthPerPixelPhaseEncode24.51
BaseResolution80
BodyPartExaminedBRAIN
CogAtlasIDTODO
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20190410 GCC6.3.0
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber166048
DwellTime2.8e-06
EchoTime0.029
EchoTrainLength80
EffectiveEchoSpacing0.000509996
FlipAngle74
ImageCommentsUnaliased_MB2_PE2_LB
ImageOrientationPatientDICOM[1, 0, 0, 0, 0.984503, -0.175367]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.246
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressNorth_13th_1701_Philadelphia_PA_US_19122
InstitutionNameTemple_University_-_Weiss_Hall
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PhaseEncodingDirectionj-
PhaseEncodingSteps80
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescriptionSmith_Lab_Smith_iStart
ProtocolNamecmrr_mbep2d_mb2_3mm_task-MID_run0
PulseSequenceDetails%CustomerSeq%_cmrr_mbep2d_bold
ReceiveCoilActiveElementsHE1-4
ReceiveCoilNameHeadNeck_20
ReconMatrixPE80
RepetitionTime1.75
SAR0.0571236
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_80
SequenceVariantSK_SS
SeriesDescriptioncmrr_mbep2d_mb2_3mm_task-MID_run0
SeriesNumber8
ShimSetting[1417, -7415, 6475, 291, -42, 9, 43, 5]
SliceThickness3
SliceTiming[0, 1.265, 0.7975, 0.3325, 1.5975, 1.13, 0.665, 0.2, 1.4625, 0.9975, 0.5325, 0.0675, 1.33, 0.865, 0.4, 1.6625, 1.1975, 0.7325, 0.265, 1.53, 1.065, 0.5975, 0.1325, 1.3975, 0.93, 0.465, 0, 1.265, 0.7975, 0.3325, 1.5975, 1.13, 0.665, 0.2, 1.4625, 0.9975, 0.5325, 0.0675, 1.33, 0.865, 0.4, 1.6625, 1.1975, 0.7325, 0.265, 1.53, 1.065, 0.5975, 0.1325, 1.3975, 0.93, 0.465]
SoftwareVersionssyngo_MR_E11
SpacingBetweenSlices3
StationNameAWP166048
TaskNameMID
TotalReadoutTime0.0402897
TxRefAmp246.738
WipMemBlock478be575-52f7-43a6-9455-894425128ab7||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum4b9c993fbd921742cdf9e00866d808b1
softwaremriqc
version0.15.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.